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Secstr_ Struct Reference

a protein secondary structure element. More...

#include <pdbread.h>

List of all members.

Public Attributes

Sectype_ Sectype
 type of secondary structure.

int No
 serial number of structure.

Str4_ Id
 identifier string.

int Beg
int End
 residue nos (1..N).

char Chid
 chain ID, for begin only.

char Begaa
char Endaa
 amino acid 1-letter codes.

char Begrid
char Endrid
 insertion codes.

int Type
 1..10 for helices, -1..1 for sheets, PDB numbering used.

int Strandno
 number of strands in this sheet.

Str4_ Thisat
Str4_ Otherat
 atom names for beta registration.

char Thisaa
char Otheraa
 amino acid codes for beta regs.

int This
int Other
 registration AA positions.

char Thisrid
char Otherid
char Otherchid
 ins codes and chain ID for the OTHER.


Detailed Description

a protein secondary structure element.

Definition at line 131 of file pdbread.h.


Member Data Documentation

Sectype_ Secstr_::Sectype
 

type of secondary structure.

Definition at line 133 of file pdbread.h.

int Secstr_::No
 

serial number of structure.

Definition at line 134 of file pdbread.h.

Str4_ Secstr_::Id
 

identifier string.

Definition at line 135 of file pdbread.h.

int Secstr_::Beg
 

Definition at line 136 of file pdbread.h.

int Secstr_::End
 

residue nos (1..N).

Definition at line 136 of file pdbread.h.

char Secstr_::Chid
 

chain ID, for begin only.

Definition at line 137 of file pdbread.h.

char Secstr_::Begaa
 

Definition at line 138 of file pdbread.h.

char Secstr_::Endaa
 

amino acid 1-letter codes.

Definition at line 138 of file pdbread.h.

char Secstr_::Begrid
 

Definition at line 139 of file pdbread.h.

char Secstr_::Endrid
 

insertion codes.

Definition at line 139 of file pdbread.h.

int Secstr_::Type
 

1..10 for helices, -1..1 for sheets, PDB numbering used.

Definition at line 140 of file pdbread.h.

int Secstr_::Strandno
 

number of strands in this sheet.

Definition at line 142 of file pdbread.h.

Str4_ Secstr_::Thisat
 

Definition at line 143 of file pdbread.h.

Str4_ Secstr_::Otherat
 

atom names for beta registration.

Definition at line 143 of file pdbread.h.

char Secstr_::Thisaa
 

Definition at line 144 of file pdbread.h.

char Secstr_::Otheraa
 

amino acid codes for beta regs.

Definition at line 144 of file pdbread.h.

int Secstr_::This
 

Definition at line 145 of file pdbread.h.

int Secstr_::Other
 

registration AA positions.

Definition at line 145 of file pdbread.h.

char Secstr_::Thisrid
 

Definition at line 146 of file pdbread.h.

char Secstr_::Otherid
 

Definition at line 146 of file pdbread.h.

char Secstr_::Otherchid
 

ins codes and chain ID for the OTHER.

Definition at line 146 of file pdbread.h.


The documentation for this struct was generated from the following file:
Generated at Wed Aug 21 09:33:33 2002 for The Razorback C Library: Bioinformatics by doxygen1.2.6 written by Dimitri van Heesch, © 1997-2001